The Emporium - Main Street USA
Merchant of Venus - Tomorrowland
(I have also heard that Mickey's Star Traders sell Vinylmation, but I do not currently have any confirmation of this)
Mouse Gear - Future World
Mission Space Cargo Bay - Future World
Villains in Vogue - Sunset Blvd.
Mickey's of Hollywood - Hollywood Blvd.
Tower Gifts - Sunset Blvd.
Disney Outfitters - Discovery Island
Island Mercantile - Discovery Island
D-Street - West Side
Once Upon A Toy - Marketplace
World Of Disney - Marketplace
If you have any stores to add, or know of any that should be removed, please leave a comment